STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM19187.1Protein of unknown function. (142 aa)    
Predicted Functional Partners:
SDM19162.1
Aldose 1-epimerase.
       0.639
SDM19140.1
Cystathionine beta-synthase.
       0.607
SDM40047.1
Hypothetical protein.
  
     0.574
SDM19116.1
Lipoprotein-releasing system permease protein.
       0.481
SDM19219.1
Cytochrome c peroxidase.
       0.475
SDL91565.1
FecR family protein.
  
     0.441
SDM59554.1
PhoD-like phosphatase.
  
     0.425
SDM19244.1
Sulfate permease, SulP family.
       0.420
SDL66355.1
Outer membrane receptor proteins, mostly Fe transport.
  
     0.413
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.