STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM23654.1Uncharacterized membrane protein YphA, DoxX/SURF4 family. (365 aa)    
Predicted Functional Partners:
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
      0.960
SDM23623.1
Protein of unknown function.
 
     0.848
SDM46721.1
Quinol:cytochrome c oxidoreductase iron-sulfur protein precursor.
   
 
  0.749
SDN07576.1
Hypothetical protein.
  
     0.747
SDL61069.1
Uncharacterized metal-binding protein YceD, DUF177 family.
  
     0.740
SDL69619.1
uroporphyrinogen-III synthase.
  
     0.726
SDM94003.1
Putative sigma-54 modulation protein.
  
     0.724
SDM00853.1
Protein involved in gliding motility GldB.
  
     0.711
SDL73943.1
Protein involved in gliding motility GldL.
  
     0.702
SDM23094.1
Outer membrane protein transport protein (OMPP1/FadL/TodX).
  
     0.702
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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