STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM19244.1Sulfate permease, SulP family. (575 aa)    
Predicted Functional Partners:
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
    
  0.774
SDM19219.1
Cytochrome c peroxidase.
       0.671
SDM19162.1
Aldose 1-epimerase.
 
     0.543
SDL27622.1
Amino acid adenylation domain-containing protein.
  
 
 0.530
SDM02103.1
Calcineurin-like phosphoesterase.
   
   0.498
SDL85665.1
Hypothetical protein.
    
   0.489
SDL66618.1
Hypothetical protein.
    
   0.480
SDL98203.1
Ankyrin repeat-containing protein.
    
   0.480
SDM33085.1
Ankyrin repeat.
    
   0.480
SDL27486.1
Amino acid adenylation domain-containing protein.
   
   0.465
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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