STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM27767.13-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit. (418 aa)    
Predicted Functional Partners:
SDM27793.1
Ferredoxin, 2Fe-2S.
 
 
 0.970
SDM27821.1
Hypothetical protein; Belongs to the cytochrome P450 family.
  
 0.954
SDM05259.1
Glutamate synthase (NADH) large subunit.
    
 0.896
SDL27622.1
Amino acid adenylation domain-containing protein.
  
 0.850
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
   
 
 0.845
SDM69140.1
Glucose/arabinose dehydrogenase, beta-propeller fold.
 
 
 0.841
SDM05019.1
Ferredoxin-nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
  
0.834
SDM01896.1
Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 0.827
SDL23054.1
FAD/FMN-containing dehydrogenase.
  
 
 0.812
SDM27744.1
S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase.
 
    0.810
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.