STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM31645.1N-terminal domain of Peptidase_S41. (434 aa)    
Predicted Functional Partners:
SDM31624.1
Hypothetical protein.
       0.584
SDM31668.1
Hypothetical protein.
       0.543
SDM31604.1
Peptidase family S41.
       0.522
SDM31584.1
CubicO group peptidase, beta-lactamase class C family.
       0.506
SDL50621.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
   0.467
SDL39666.1
Sugar-transfer associated ATP-grasp.
  
  
  0.439
SDM09339.1
SprB repeat-containing protein.
  
   0.436
pheT
phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
   
 
 0.429
SDL35232.1
BAAT / Acyl-CoA thioester hydrolase C terminal.
  
     0.419
SDL42267.1
Phosphoesterase RecJ domain-containing protein.
    
   0.418
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.