STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM37397.1TRAP transporter, DctM subunit. (424 aa)    
Predicted Functional Partners:
SDM37327.1
Tripartite ATP-independent transporter solute receptor, DctP family.
  
 0.991
SDM37356.1
TRAP-type C4-dicarboxylate transport system, small permease component.
 
 0.971
SDM56069.1
TRAP-type C4-dicarboxylate transport system, small permease component.
 
 0.933
SDM56096.1
Tripartite ATP-independent transporter solute receptor, DctP family.
  
 0.927
SDL50621.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
  0.857
SDL27622.1
Amino acid adenylation domain-containing protein.
   
 0.689
SDM37295.1
Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family.
       0.636
SDM37429.1
Carboxylesterase family protein.
       0.601
SDM37258.1
L-seryl-tRNA(Ser) seleniumtransferase.
       0.567
SDM37223.1
Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family.
       0.521
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.