STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM38585.1Outer membrane protein beta-barrel domain-containing protein. (195 aa)    
Predicted Functional Partners:
SDM38650.1
Outer membrane lipoprotein carrier protein.
 
    0.853
SDM38711.1
3-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
     0.833
SDM38745.1
3-oxoacyl-[acyl-carrier-protein] synthase-1; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
     0.803
SDM38620.1
Hypothetical protein.
       0.773
SDM38680.1
Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family.
       0.773
SDM38528.1
Hypothetical protein.
 
     0.744
SDM38557.1
3-hydroxyacyl-[acyl-carrier-protein] dehydratase.
 
     0.684
SDM38806.1
Hypothetical protein.
 
     0.654
SDM38468.1
Hypothetical protein.
 
     0.640
SDM39013.1
Hypothetical protein.
 
     0.639
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.