STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM45755.1Purine-cytosine permease. (470 aa)    
Predicted Functional Partners:
SDM45700.1
Sugar (pentulose or hexulose) kinase.
 
     0.890
SDM45670.1
L-rhamnose isomerase / sugar isomerase.
 
     0.758
SDM45640.1
Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
 
     0.669
SDM45724.1
L-lactate dehydrogenase (cytochrome).
       0.612
SDM45392.1
Transcriptional regulator, GntR family.
 
     0.584
pyrB
Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
   
    0.577
SDL87851.1
Carbamoyl-phosphate synthase large subunit.
   
    0.559
carA
Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family.
   
    0.551
SDM29662.1
Putative collagen-binding domain of a collagenase.
  
     0.533
SDM41635.1
Putative collagen-binding domain of a collagenase.
  
     0.527
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.