STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM45187.1Small GTP-binding protein domain-containing protein. (173 aa)    
Predicted Functional Partners:
SDM45155.1
Hypothetical protein.
 
     0.950
SDM45218.1
Signal transduction histidine kinase.
 
 
   0.881
SDM83728.1
Molecular chaperone HtpG; Molecular chaperone. Has ATPase activity.
  
 0.836
SDM33085.1
Ankyrin repeat.
 
 0.816
SDL82560.1
ATPase family associated with various cellular activities (AAA).
    
 0.792
SDL66618.1
Hypothetical protein.
  
 0.771
SDL98203.1
Ankyrin repeat-containing protein.
  
 0.771
SDM15494.1
Chloride channel protein, CIC family.
   
 0.735
SDM45127.1
Hypothetical protein.
       0.721
SDL37325.1
Cardiolipin synthase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.
    
 0.689
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.