STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbsAMonosaccharide ABC transporter ATP-binding protein, CUT2 family; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (505 aa)    
Predicted Functional Partners:
SDM52249.1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
 0.999
SDM52168.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
 0.998
SDL99650.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
  
 0.883
SDM52139.1
Transketolase subunit B.
 
    0.813
SDL36004.1
ABC-2 type transport system permease protein.
 
      0.795
SDM52195.1
Predicted lipoprotein.
       0.791
SDM52099.1
Transketolase subunit A.
  
    0.789
SDM52034.1
Transcriptional regulator, DeoR family.
 
   
 0.731
SDM52068.1
L-fucose isomerase.
 
     0.728
SDM52276.1
Glycerol kinase; Belongs to the FGGY kinase family.
  
  
 0.727
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.