STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM61441.1Transcriptional regulator, AraC family. (344 aa)    
Predicted Functional Partners:
SDL50621.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
     
 0.823
SDM05259.1
Glutamate synthase (NADH) large subunit.
    
  0.732
SDL71072.1
AraC-type DNA-binding protein.
  
   0.730
SDL49680.1
AraC-type DNA-binding protein.
  
 
   0.665
SDL21513.1
Transcriptional regulator, AraC family.
  
     0.655
SDM61549.1
Transcriptional regulator, AraC family.
 
     0.649
SDM30196.1
Transcriptional regulator, AraC family.
  
     0.640
SDM71684.1
AraC-type DNA-binding protein.
  
     0.637
SDM05718.1
AraC-type DNA-binding protein.
  
   0.612
SDL39311.1
Transcriptional regulator, AraC family.
  
   0.575
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.