STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM60701.1Arylsulfatase A. (593 aa)    
Predicted Functional Partners:
SDM60665.1
Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
 
     0.838
SDM60733.1
Arylsulfatase A.
 
    
0.757
SDM60632.1
Glycosyl hydrolases family 43.
     0.716
SDM60759.1
Hypothetical protein.
       0.625
SDM60603.1
Arylsulfatase A.
 
    
0.524
SDM60789.1
PhoD-like phosphatase.
    
  0.521
SDL67924.1
Glycosyl hydrolases family 16.
  
     0.509
SDL92315.1
Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain.
  
 
   0.445
SDM67133.1
Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
  
     0.430
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.429
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.