STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM65660.1Helix-turn-helix. (65 aa)    
Predicted Functional Partners:
SDM83278.1
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
    
 0.808
SDM65688.1
Type I restriction enzyme M protein.
       0.748
SDM65715.1
Type I restriction enzyme, S subunit.
  
    0.746
SDL50621.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
  0.729
SDM65734.1
Type I restriction enzyme, R subunit; Subunit R is required for both nuclease and ATPase activities, but not for modification.
       0.655
SDN08911.1
Serine/threonine-protein kinase HipA.
  
 
 0.513
SDN11885.1
Protein of unknown function.
  
     0.451
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.