STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM66564.1Transcriptional regulator, DeoR family. (251 aa)    
Predicted Functional Partners:
SDL36692.1
6-phosphofructokinase 2; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.760
SDM66599.1
Uncharacterized conserved protein YbbC, DUF1343 family.
       0.634
SDM66535.1
TonB-linked outer membrane protein, SusC/RagA family.
       0.552
SDN04691.1
Ribose 5-phosphate isomerase B.
  
 
 0.520
SDM66506.1
Starch-binding associating with outer membrane.
       0.492
SDL65190.1
Homodimeric glycerol 3-phosphate dehydrogenase (quinone).
 
  
 0.428
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.