STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM71987.1Cupin domain-containing protein. (230 aa)    
Predicted Functional Partners:
SDM69587.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
    
  0.776
SDM72020.1
AraC-type DNA-binding protein.
   
   0.494
SDL39311.1
Transcriptional regulator, AraC family.
  
  0.456
SDL71072.1
AraC-type DNA-binding protein.
  
  0.456
SDM05718.1
AraC-type DNA-binding protein.
  
  0.456
SDM19480.1
Transcriptional regulator, AraC family.
  
  0.456
SDM36750.1
Transcriptional regulator, AraC family.
  
  0.456
SDM72052.1
Acyl-CoA dehydrogenase.
    
  0.433
SDM00670.1
TolB amino-terminal domain-containing protein.
   
   0.412
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
  
 
  0.405
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.