STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM69119.1Protein of unknown function. (558 aa)    
Predicted Functional Partners:
SDM69034.1
Right handed beta helix region.
 
     0.849
SDM67163.1
Hypothetical protein.
 
     0.724
SDM69281.1
alpha-L-fucosidase.
 
     0.712
SDM19573.1
Right handed beta helix region.
  
     0.709
SDM67133.1
Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
  
     0.698
SDM67222.1
Alpha-glucosidase.
  
     0.669
SDN03225.1
Lysophospholipase L1.
  
     0.658
SDL26481.1
YHYH protein.
  
     0.654
SDM04127.1
Alpha-L-fucosidase.
  
     0.649
SDM04175.1
alpha-L-fucosidase.
  
     0.640
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.