STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM71260.1Lysophospholipase L1. (244 aa)    
Predicted Functional Partners:
SDM27949.1
Pectate lyase superfamily protein; Belongs to the glycosyl hydrolase 28 family.
 
  0.981
SDM45098.1
Pectate lyase superfamily protein; Belongs to the glycosyl hydrolase 28 family.
 
  0.934
SDM36177.1
Pectate lyase, PelA/Pel-15E family.
     0.838
SDM29992.1
Polygalacturonase; Belongs to the glycosyl hydrolase 28 family.
 
  0.831
SDM45272.1
Glycosyl hydrolases family 2, sugar binding domain.
 
  0.820
SDM27972.1
Unsaturated rhamnogalacturonyl hydrolase.
  
  0.788
SDN09571.1
Pectate lyase.
  
  0.763
SDM51812.1
Pectate lyase.
  
  0.762
SDM12158.1
Por secretion system C-terminal sorting domain-containing protein.
  
  
  0.734
SDL39453.1
Hypothetical protein.
 
  
  0.718
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.