STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM71535.1Oxidoreductase family, C-terminal alpha/beta domain. (464 aa)    
Predicted Functional Partners:
SDM61835.1
Oxidoreductase family, NAD-binding Rossmann fold.
  
     0.478
SDL92288.1
Galactokinase; Belongs to the GHMP kinase family. GalK subfamily.
   
  0.466
SDL37562.1
Predicted dehydrogenase.
  
     0.461
cobB
NAD-dependent deacetylase; Belongs to the sirtuin family. Class III subfamily.
    
  0.459
SDM71505.1
Lysophospholipase L1.
       0.435
SDN07117.1
Sugar phosphate isomerase/epimerase.
  
 
  0.404
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
Server load: low (16%) [HD]