STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM75037.1Hypothetical protein. (161 aa)    
Predicted Functional Partners:
SDM75004.1
Glycosyl transferase family 2.
 
     0.891
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
 
  0.880
SDL27622.1
Amino acid adenylation domain-containing protein.
  
 0.687
SDM75070.1
3-oxoacyl-[acyl-carrier-protein] synthase-3.
       0.682
SDM98428.1
Hypothetical protein.
  
     0.626
SDL69949.1
Threonine/homoserine/homoserine lactone efflux protein.
  
     0.623
SDM01634.1
Putative auto-transporter adhesin, head GIN domain.
  
     0.601
SDM91504.1
Kynurenine 3-monooxygenase.
   
 0.593
SDM11855.1
Outer membrane protein beta-barrel domain-containing protein.
  
     0.589
SDM77392.1
N-Dimethylarginine dimethylaminohydrolase.
  
  
  0.587
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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