STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM84392.16-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase. (137 aa)    
Predicted Functional Partners:
queE
Organic radical activating enzyme; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.
 
 
 0.982
folE
GTP cyclohydrolase I.
  
 
 0.909
folE-2
GTP cyclohydrolase I.
  
 
 0.909
SDL62815.1
6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase.
  
  
  0.906
SDM84422.1
Isopentenyl-diphosphate delta-isomerase.
       0.818
SDM91613.1
Dinuclear metal center protein, YbgI/SA1388 family; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.
    
 0.816
SDM84362.1
Mannose-6-phosphate isomerase, type 1.
     
 0.630
SDM84457.1
Type IX secretion system membrane protein, PorP/SprF family.
       0.615
SDM84492.1
Gliding motility-associated C-terminal domain-containing protein.
       0.615
SDM84525.1
Hypothetical protein.
       0.574
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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