STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM82664.1Hypothetical protein. (178 aa)    
Predicted Functional Partners:
SDM82694.1
Hypothetical protein.
       0.705
SDN04691.1
Ribose 5-phosphate isomerase B.
  
 
 0.646
SDL36692.1
6-phosphofructokinase 2; Belongs to the carbohydrate kinase PfkB family.
  
  
 0.638
SDM82639.1
Hypothetical protein.
       0.596
SDM82608.1
Hypothetical protein.
       0.497
SDM69765.1
Polysaccharide deacetylase.
   
   0.493
SDL45631.1
Hypothetical protein.
   
   0.456
SDL70542.1
PAP2 superfamily protein.
   
   0.456
SDL71899.1
Hypothetical protein.
   
   0.456
SDL98056.1
Gliding motility-associated C-terminal domain-containing protein.
   
   0.456
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.