STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM89009.1Predicted dehydrogenase. (360 aa)    
Predicted Functional Partners:
SDM55254.1
Predicted dehydrogenase.
  
     0.578
SDM89034.1
3-hydroxybutyryl-CoA dehydrogenase.
    
  0.530
SDM05794.1
Predicted dehydrogenase.
  
  
  0.516
SDM88979.1
Protein of unknown function.
       0.516
SDL74324.1
Predicted dehydrogenase.
  
  
  0.472
SDL92288.1
Galactokinase; Belongs to the GHMP kinase family. GalK subfamily.
   
  0.466
SDM05671.1
D-psicose/D-tagatose/L-ribulose 3-epimerase.
  
 
  0.464
cobB
NAD-dependent deacetylase; Belongs to the sirtuin family. Class III subfamily.
    
  0.459
SDL87574.1
Sugar phosphate isomerase/epimerase.
   
 
  0.451
SDL39236.1
Predicted dehydrogenase.
  
     0.419
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.