STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM96398.1Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein. (175 aa)    
Predicted Functional Partners:
SDL50621.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
  0.864
SDL42493.1
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein.
  
     0.775
SDL30623.1
Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA.
  
     0.774
SDL61393.1
Winged helix-turn-helix DNA-binding.
  
     0.774
SDM96374.1
Hypothetical protein.
       0.563
SDM96428.1
Small conductance mechanosensitive channel.
       0.472
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.