STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM95842.1Predicted transcriptional regulator. (126 aa)    
Predicted Functional Partners:
SDM95816.1
BlaR1 peptidase M56.
 
 
 0.994
SDM53922.1
Signal transducer regulating beta-lactamase production, contains metallopeptidase domain.
 
 
 0.967
SDM53420.1
Signal transducer regulating beta-lactamase production, contains metallopeptidase domain.
 
 
 0.937
SDM53463.1
TonB family C-terminal domain-containing protein.
 
 
 0.875
SDM53953.1
Predicted transcriptional regulator.
  
  
 
0.870
SDM53391.1
Predicted transcriptional regulator.
  
  
 
0.861
SDL73451.1
Cu2+-exporting ATPase.
  
  
 0.651
SDM95869.1
cation:H+ antiporter.
       0.550
SDL73508.1
Copper chaperone CopZ.
  
  
 0.494
SDM32237.1
Copper chaperone CopZ.
  
  
 0.494
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.