STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN03270.1PAS domain S-box-containing protein. (352 aa)    
Predicted Functional Partners:
SDN07491.1
Signal transduction histidine kinase.
 0.999
SDL28699.1
Hypothetical protein.
  
 0.998
SDL99650.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
 0.998
SDL50590.1
Signal transduction histidine kinase.
 0.989
SDM69476.1
Multi-sensor hybrid histidine kinase.
 0.987
SDM84266.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
 0.986
SDL47560.1
Signal transduction histidine kinase.
 0.984
SDM91679.1
Signal transduction histidine kinase.
 0.983
SDL50203.1
Two component regulator propeller.
 
 0.982
SDL49302.1
Signal transduction histidine kinase.
 
 0.982
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.