STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN06786.1Aldose 1-epimerase. (308 aa)    
Predicted Functional Partners:
SDL92288.1
Galactokinase; Belongs to the GHMP kinase family. GalK subfamily.
 0.975
SDL81800.1
exo-1,4-beta-D-glucosaminidase; Belongs to the glycosyl hydrolase 2 family.
  
 
 0.763
glk
Glucokinase; Belongs to the bacterial glucokinase family.
     
 0.754
SDL45447.1
Putative hydrolase of the HAD superfamily.
   
 
  0.751
SDM87437.1
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
 
 0.707
SDN06760.1
RNA polymerase sigma-70 factor, ECF subfamily.
       0.542
SDN06716.1
Hypothetical protein.
       0.542
SDN06737.1
Hypothetical protein.
       0.542
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.