STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN10162.1Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain. (315 aa)    
Predicted Functional Partners:
SDM16201.1
Flavodoxin.
      0.821
SDM03283.1
Gliding motility-associated lipoprotein GldJ.
  
     0.751
SDM45334.1
Arylsulfatase A.
  
 
   0.541
SDM05413.1
Arylsulfatase A.
  
 
   0.518
SDM02754.1
Dimethylhistidine N-methyltransferase.
 
 
 0.512
SDL68296.1
Arylsulfatase A.
  
   0.508
SDL91403.1
Sulfatase.
  
 
   0.501
SDM30077.1
Arylsulfatase A.
  
 
   0.494
SDL32757.1
Arylsulfatase A.
  
 
   0.490
SDL32618.1
Arylsulfatase A.
  
 
   0.488
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.