STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN11133.1Transcriptional regulator, GntR family. (245 aa)    
Predicted Functional Partners:
SDN11186.1
Mannose-6-phosphate isomerase, class I.
 
    0.944
SDN11110.1
Glucokinase.
 
 
  0.842
SDL50621.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.807
SDN11082.1
Alpha-1,2-mannosidase, putative.
 
     0.792
SDN11158.1
Hypothetical protein.
       0.762
SDN11019.1
Alpha-1,2-mannosidase, putative.
 
     0.684
SDM75964.1
Susd and RagB outer membrane lipoprotein.
  
     0.447
SDL39311.1
Transcriptional regulator, AraC family.
   
    0.437
SDL47766.1
N-acetylglucosamine-6-phosphate deacetylase.
  
  
 0.437
SDL71072.1
AraC-type DNA-binding protein.
   
    0.437
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.