STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN14096.1Hypothetical protein. (393 aa)    
Predicted Functional Partners:
SDM91119.1
Hypothetical protein.
 
    
0.899
SDN14071.1
Gliding motility-associated C-terminal domain-containing protein.
 
  
  0.830
SDL40491.1
Beta-glucosidase.
     
 0.723
SDN14050.1
Hypothetical protein.
   
  0.656
SDL82757.1
Hypothetical protein.
  
 
 
 0.568
SDM10045.1
Hypothetical protein.
  
     0.566
SDL23388.1
Hypothetical protein.
  
     0.557
SDM46515.1
Sodium/proton antiporter, CPA1 family.
  
     0.554
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
    
  0.516
SDL72362.1
ADP-ribosylglycohydrolase.
  
     0.497
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.