STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN14280.1Protein of unknown function. (483 aa)    
Predicted Functional Partners:
SDN14253.1
Uncharacterized membrane protein.
 
     0.946
SDL74497.1
Planctomycete cytochrome C.
  
     0.775
SDL93454.1
Concanavalin A-like lectin/glucanases superfamily protein.
  
     0.775
SDM03394.1
Planctomycete cytochrome C.
  
     0.775
SDM03412.1
Planctomycete cytochrome C.
  
     0.775
SDM42064.1
Carbohydrate binding module (family 6).
  
     0.775
SDM36978.1
Planctomycete cytochrome C.
  
     0.775
SDM52415.1
Planctomycete cytochrome C.
  
     0.775
SDM64546.1
Planctomycete cytochrome C.
  
     0.775
SDM88013.1
Concanavalin A-like lectin/glucanases superfamily protein.
  
     0.775
Your Current Organism:
Kriegella aquimaris
NCBI taxonomy Id: 192904
Other names: DSM 19886, K. aquimaris, KCTC 22188, KMM 3665, Kriegella aquimaris Nedashkovskaya et al. 2008, Zobellia sp. KMM 3665
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.