STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001941075_00170Unannotated protein. (296 aa)    
Predicted Functional Partners:
GCA_001941075_00625
Unannotated protein.
  
     0.772
GCA_001941075_00171
Unannotated protein.
       0.639
GCA_001941075_00172
Unannotated protein.
     
 0.577
GCA_001941075_00166
Unannotated protein.
 
     0.565
GCA_001941075_00168
Unannotated protein.
       0.528
GCA_001941075_00169
Unannotated protein.
       0.528
GCA_001941075_00167
Unannotated protein.
       0.525
GCA_001941075_00165
Unannotated protein.
 
    0.400
Your Current Organism:
Oscillospiraceae bacterium Zagget6
NCBI taxonomy Id: 1930019
Other names: O. bacterium Zagget6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.