STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001941075_01229Unannotated protein. (286 aa)    
Predicted Functional Partners:
GCA_001941075_01227
Unannotated protein.
 0.999
GCA_001941075_01208
Unannotated protein.
 
 
    0.900
GCA_001941075_01144
Unannotated protein.
 
 
    0.899
GCA_001941075_01228
Unannotated protein.
 
  
 
0.876
GCA_001941075_00549
Unannotated protein.
 
   
  0.854
GCA_001941075_00478
Unannotated protein.
   
 
 0.847
GCA_001941075_01226
Unannotated protein.
  
  
 0.740
GCA_001941075_00309
Unannotated protein.
 
   
 
0.734
GCA_001941075_00308
Unannotated protein.
 
   
 
0.711
GCA_001941075_01455
Unannotated protein.
  
 
 0.649
Your Current Organism:
Oscillospiraceae bacterium Zagget6
NCBI taxonomy Id: 1930019
Other names: O. bacterium Zagget6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.