STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002078605_00212Unannotated protein. (180 aa)    
Predicted Functional Partners:
GCA_002078605_00586
Unannotated protein.
 
  
  0.967
GCA_002078605_02181
Unannotated protein.
  
 
 0.850
GCA_002078605_00593
Unannotated protein.
 
     0.794
GCA_002078605_01645
Unannotated protein.
 
  
  0.770
GCA_002078605_02103
Unannotated protein.
 
    0.680
GCA_002078605_00139
Unannotated protein.
     
 0.657
GCA_002078605_00864
Unannotated protein.
  
 
 0.613
GCA_002078605_00654
Unannotated protein.
 
     0.608
GCA_002078605_00213
Unannotated protein.
    
 0.592
GCA_002078605_01647
Unannotated protein.
    
 0.585
Your Current Organism:
Salegentibacter sediminis
NCBI taxonomy Id: 1930251
Other names: KCTC 52477, MCCC 1H00173, S. sediminis, Salegentibacter sp. K5023, strain K5023
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.