STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002025205_00961Unannotated protein. (327 aa)    
Predicted Functional Partners:
GCA_002025205_04238
Unannotated protein.
 
  
 0.871
GCA_002025205_04205
Unannotated protein.
 
  
 0.852
GCA_002025205_01210
Unannotated protein.
 
  
 0.841
GCA_002025205_04485
Unannotated protein.
    
 0.839
GCA_002025205_01284
Unannotated protein.
  
  
 0.801
GCA_002025205_00962
Unannotated protein.
       0.789
GCA_002025205_02749
Unannotated protein.
 
  
 0.785
GCA_002025205_00692
Unannotated protein.
    
 0.781
GCA_002025205_00375
Unannotated protein.
 
  
 0.760
GCA_002025205_02210
Unannotated protein.
    
 0.752
Your Current Organism:
Pseudomonas sp. CC6YY74
NCBI taxonomy Id: 1930532
Other names: P. sp. CC6-YY-74, Pseudomonas sp. CC6-YY-74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.