Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
APU96100.1 | APU96101.1 | BV902_06900 | BV902_06905 | Magnesium transporter CorA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Outer membrane chaperone Skp; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.559 |
APU96100.1 | bioB | BV902_06900 | BV902_23935 | Magnesium transporter CorA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Biotin synthase BioB; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. | 0.419 |
APU96101.1 | APU96100.1 | BV902_06905 | BV902_06900 | Outer membrane chaperone Skp; Derived by automated computational analysis using gene prediction method: Protein Homology. | Magnesium transporter CorA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.559 |
bioB | APU96100.1 | BV902_23935 | BV902_06900 | Biotin synthase BioB; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. | Magnesium transporter CorA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.419 |