STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIV_17330AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (156 aa)    
Predicted Functional Partners:
CSIV_17335
Aspartate aminotransferase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
     0.948
CSIV_03510
AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.651
CSIV_04580
Chorismate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.644
CSIV_07110
AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.611
CSIV_00690
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.589
CSIV_02200
PTS beta-glucoside transporter subunit EIIBCA; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.589
CSIV_02365
Bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.526
CSIV_17325
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.514
CSIV_17315
Aspartate aminotransferase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
     0.481
CSIV_17340
Putrescine importer PuuP; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.435
Your Current Organism:
Microbacterium sp. CSIV
NCBI taxonomy Id: 1933777
Other names: M. sp. CSI-V, Microbacterium sp. CSI-V
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