STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ONI87998.1IS256 family transposase; Required for the transposition of the insertion element. (432 aa)    
Predicted Functional Partners:
ONI87997.1
Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.603
ONI85712.1
Ribonuclease E/G; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.594
ONI92962.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.593
hisH
Imidazole glycerol phosphate synthase subunit HisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.
    
  0.562
ONI80249.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.530
ALI22I_00860
DDE endonuclease; Frameshifted; incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.527
ONI91396.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.519
ONI91428.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.516
ONI93018.1
IS3 family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.504
ONI91087.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.450
Your Current Organism:
Saccharothrix sp. ALI22I
NCBI taxonomy Id: 1933778
Other names: S. sp. ALI-22-I, Saccharothrix sp. ALI-22-I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.