STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ONI70240.1Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (267 aa)    
Predicted Functional Partners:
ONI70239.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.991
ONI70238.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.986
ONI81588.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.974
ONI77203.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
 
 0.973
ONI78830.1
Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
 
 0.960
ONI79715.1
Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
 
 0.959
ONI74662.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
 
 0.959
ONI70913.1
Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.958
ONI84228.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.956
ONI79208.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.956
Your Current Organism:
Actinosynnema sp. ALI144
NCBI taxonomy Id: 1933779
Other names: A. sp. ALI-1.44, Actinosynnema sp. ALI-1.44
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.