STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ONI78552.1Cytidine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. (140 aa)    
Predicted Functional Partners:
ONI78417.1
Thymidine phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
ONI78416.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.913
ONI78414.1
Heme ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.911
ONI78415.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.908
ONI72015.1
Purine-nucleoside phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.894
ONI75576.1
Cytidine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.891
ONI69131.1
Thymidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.890
ONI78555.1
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate.
 
 
 0.868
ONI78420.1
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.857
ONI75653.1
Bifunctional metallophosphatase/5'-nucleotidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 5'-nucleotidase family.
    
  0.842
Your Current Organism:
Kribbella sp. ALI6A
NCBI taxonomy Id: 1933817
Other names: K. sp. ALI-6-A, Kribbella sp. ALI-6-A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.