STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lptDLPS-assembly protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family. (784 aa)    
Predicted Functional Partners:
AQX27818.1
Lipopolysaccharide export system permease protein; IMG locus_tag: Ga0114328_11406.
 
  
 0.967
AQX28610.1
Lipopolysaccharide export system protein LptA; IMG locus_tag: Ga0114328_111244.
 
 0.947
AQX27816.1
Periplasmic chaperone for outer membrane proteins SurA; IMG locus_tag: Ga0114328_11404.
 
  
 0.907
AQX27819.1
Lipopolysaccharide export system permease protein; IMG locus_tag: Ga0114328_11407.
 
  
 0.905
AQX28611.1
Lipopolysaccharide export system ATP-binding protein; IMG locus_tag: Ga0114328_111245.
  
 
 0.741
AQX28513.1
Outer membrane lipoprotein-sorting protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
  
   
 0.729
AQX27995.1
Invasion protein IalB, involved in pathogenesis; IMG locus_tag: Ga0114328_11591.
  
     0.722
AQX28506.1
Cell division transport system permease protein; IMG locus_tag: Ga0114328_111138.
  
    0.716
AQX28609.1
Lipopolysaccharide export system protein LptC; IMG locus_tag: Ga0114328_111243.
 
   
 0.697
AQX27840.1
Peptidyl-prolyl cis-trans isomerase D; IMG locus_tag: Ga0114328_11429.
 
  
 0.694
Your Current Organism:
Bartonella sp. JB15
NCBI taxonomy Id: 1933906
Other names: B. sp. JB15
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.