STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pqqBCoenzyme PQQ synthesis protein B; May be involved in the transport of PQQ or its precursor to the periplasm; Belongs to the PqqB family. (314 aa)    
Predicted Functional Partners:
pqqC
Pyrroloquinoline-quinone synthase; Ring cyclization and eight-electron oxidation of 3a-(2-amino- 2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline-7,9- dicarboxylic-acid to PQQ.
  
 0.997
pqqD
Coenzyme PQQ synthesis protein D.
 
  
 0.989
moxF_1
Methanol dehydrogenase [cytochrome c] subunit 1.
 
  
 0.795
moxF_3
Methanol dehydrogenase [cytochrome c] subunit 1.
 
  
 0.788
OOO03573.1
Magnesium transporter MgtE; Acts as a magnesium transporter.
     
 0.624
OOO01597.1
Hypothetical protein.
  
     0.600
lipA
Lipoyl synthase.
     
 0.574
luxQ_1
Autoinducer 2 sensor kinase/phosphatase LuxQ.
  
  
 0.530
OOO02843.1
Hypothetical protein.
 
     0.521
queE_1
7-carboxy-7-deazaguanine synthase.
  
  
 0.492
Your Current Organism:
Chromatiales bacterium USCgTaylor
NCBI taxonomy Id: 1934255
Other names: C. bacterium USCg_Taylor, Chromatiales bacterium USCg_Taylor
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