STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OOO03525.1Hypothetical protein. (87 aa)    
Predicted Functional Partners:
yhdJ_1
DNA adenine methyltransferase YhdJ.
       0.773
OOO03524.1
Hypothetical protein.
       0.773
OOO03526.1
Antitoxin VapB41.
       0.773
OOO03522.1
Hypothetical protein.
       0.727
OOO03519.1
Hypothetical protein.
   
   0.668
OOO01134.1
Antitoxin VapB25.
   
   0.668
OOO03527.1
Hypothetical protein.
       0.645
OOO03528.1
Hypothetical protein.
       0.645
Your Current Organism:
Chromatiales bacterium USCgTaylor
NCBI taxonomy Id: 1934255
Other names: C. bacterium USCg_Taylor, Chromatiales bacterium USCg_Taylor
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.