STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tupBTungstate uptake system permease protein TupB. (234 aa)    
Predicted Functional Partners:
tupC
Tungstate uptake system ATP-binding protein TupC.
  
  0.977
tupA
Tungstate-binding protein TupA.
 
  
 0.973
OOO03529.1
Hypothetical protein.
 
 
 0.887
mopA
Molybdenum-pterin-binding protein MopA.
    
 0.846
OOO01172.1
Putative formate dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
     0.756
nqo1
NADH-quinone oxidoreductase subunit 1.
 
     0.655
fbpC2
Fe(3+) ions import ATP-binding protein FbpC 2; Belongs to the ABC transporter superfamily.
   
 0.559
pstB3_2
Phosphate import ATP-binding protein PstB 3; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
   
 0.513
OOO00944.1
Hypothetical protein.
  
     0.493
pstB3_1
Phosphate import ATP-binding protein PstB 3; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
   
 0.483
Your Current Organism:
Chromatiales bacterium USCgTaylor
NCBI taxonomy Id: 1934255
Other names: C. bacterium USCg_Taylor, Chromatiales bacterium USCg_Taylor
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.