STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
menH_12-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase. (307 aa)    
Predicted Functional Partners:
OOO02038.1
Long-chain-fatty-acid--AMP ligase FadD26.
 
 0.984
apaH
Bis(5'-nucleosyl)-tetraphosphatase, symmetrical; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.
    
  0.925
afr
1,5-anhydro-D-fructose reductase.
   
 
 0.799
lcfB_2
Long-chain-fatty-acid--CoA ligase.
   
 0.787
icmF
Fused isobutyryl-CoA mutase.
     
 0.764
gcvT
Aminomethyltransferase; Belongs to the GcvT family.
     
 0.747
guaA
GMP synthase [glutamine-hydrolyzing].
   
  0.744
pheA_1
P-protein.
     
 0.731
pheA_2
Prephenate dehydratase.
     
 0.731
putC
1-pyrroline-5-carboxylate dehydrogenase 2; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family.
     
 0.728
Your Current Organism:
Chromatiales bacterium USCgTaylor
NCBI taxonomy Id: 1934255
Other names: C. bacterium USCg_Taylor, Chromatiales bacterium USCg_Taylor
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.