STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdaCPeptidoglycan-N-acetylmuramic acid deacetylase PdaC. (271 aa)    
Predicted Functional Partners:
OOO02278.1
Hypothetical protein.
 
     0.944
gerN_2
Na(+)/H(+)-K(+) antiporter GerN.
 
     0.811
OOO01099.1
Hypothetical protein.
 
  
  0.802
OOO01097.1
Hypothetical protein.
 
  
  0.798
OOO01103.1
Hypothetical protein.
 
     0.774
OOO01102.1
Hypothetical protein.
 
     0.772
OOO01100.1
Hypothetical protein.
 
     0.744
lodB
Putative FAD-dependent oxidoreductase LodB.
 
     0.724
ppm1
Polyprenol monophosphomannose synthase.
 
 
  0.709
OOO01096.1
Hypothetical protein.
 
     0.704
Your Current Organism:
Chromatiales bacterium USCgTaylor
NCBI taxonomy Id: 1934255
Other names: C. bacterium USCg_Taylor, Chromatiales bacterium USCg_Taylor
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.