STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OOO02034.1Hypothetical protein. (145 aa)    
Predicted Functional Partners:
mrcB
Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits).
 
     0.900
luxQ_1
Autoinducer 2 sensor kinase/phosphatase LuxQ.
    
 0.740
tctD
Transcriptional regulatory protein tctD.
    
 0.679
luxQ_3
Autoinducer 2 sensor kinase/phosphatase LuxQ.
    
 0.679
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate. Belongs to the DHBP synthase family.
    
  0.667
ribBA
Riboflavin biosynthesis protein RibBA.
    
  0.667
OOO02846.1
Hypothetical protein.
  
     0.641
nlpD
Murein hydrolase activator NlpD.
   
   0.587
OOO01792.1
Hypothetical protein.
  
     0.518
OOO02030.1
Hypothetical protein.
       0.508
Your Current Organism:
Chromatiales bacterium USCgTaylor
NCBI taxonomy Id: 1934255
Other names: C. bacterium USCg_Taylor, Chromatiales bacterium USCg_Taylor
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.