STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OOO02009.1Hypothetical protein. (119 aa)    
Predicted Functional Partners:
OOO02007.1
Hypothetical protein.
 
     0.672
OOO02008.1
Hypothetical protein.
       0.559
OOO02899.1
Hypothetical protein.
  
     0.526
hflD
High frequency lysogenization protein HflD.
  
     0.514
OOO03213.1
Hypothetical protein.
  
     0.500
OOO03659.1
Hypothetical protein.
  
     0.463
OOO01315.1
Hypothetical protein.
  
     0.457
OOO02103.1
Hypothetical protein.
  
     0.451
OOO02374.1
Hypothetical protein.
  
     0.425
OOO01879.1
Hypothetical protein.
  
     0.422
Your Current Organism:
Chromatiales bacterium USCgTaylor
NCBI taxonomy Id: 1934255
Other names: C. bacterium USCg_Taylor, Chromatiales bacterium USCg_Taylor
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.