STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
argE_1Acetylornithine deacetylase. (473 aa)    
Predicted Functional Partners:
argA
Amino-acid acetyltransferase; Belongs to the acetyltransferase family. ArgA subfamily.
  
 
 0.849
glxR
2-hydroxy-3-oxopropionate reductase.
  
    0.774
apc3
Acetophenone carboxylase gamma subunit.
 
  
 0.738
argF
Ornithine carbamoyltransferase 1, phaseolotoxin-sensitive; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
  
 
 0.652
OOO01986.1
Hypothetical protein.
   
  0.647
OOO01148.1
Putative FAD-linked oxidoreductase.
   
  0.647
bepA_5
Beta-barrel assembly-enhancing protease.
       0.639
OOO01809.1
Hypothetical protein.
       0.639
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
 0.624
argC
N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.
  
 0.622
Your Current Organism:
Chromatiales bacterium USCgTaylor
NCBI taxonomy Id: 1934255
Other names: C. bacterium USCg_Taylor, Chromatiales bacterium USCg_Taylor
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