STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OOO01247.1Hypothetical protein. (405 aa)    
Predicted Functional Partners:
OOO01248.1
Hypothetical protein.
  
 0.954
OOO01246.1
Hypothetical protein.
      0.872
OOO01243.1
Hypothetical protein.
       0.787
icaA
Poly-beta-1,6-N-acetyl-D-glucosamine synthase.
       0.786
OOO01244.1
Hypothetical protein.
       0.773
mdtC
Multidrug resistance protein MdtC; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
   
  0.605
bepE
Efflux pump membrane transporter BepE; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
   
  0.605
mexB
Multidrug resistance protein MexB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
   
  0.605
mdtA_1
Multidrug resistance protein MdtA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   
  0.551
czcB
Cobalt-zinc-cadmium resistance protein CzcB.
   
  0.551
Your Current Organism:
Chromatiales bacterium USCgTaylor
NCBI taxonomy Id: 1934255
Other names: C. bacterium USCg_Taylor, Chromatiales bacterium USCg_Taylor
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.