STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pelLPectate lyase L. (254 aa)    
Predicted Functional Partners:
OOO00799.1
Hypothetical protein.
 
     0.866
OOO03521.1
Hypothetical protein.
   
 0.800
tesA
Esterase TesA.
   
 0.800
OOO00797.1
Hypothetical protein.
       0.783
OOO00844.1
Hypothetical protein.
 
 
   0.691
OOO00791.1
Hypothetical protein.
 
 
   0.684
OOO02674.1
Hypothetical protein.
  
 
  0.576
OOO01437.1
Hypothetical protein.
   
   0.548
OOO02808.1
Hypothetical protein.
   
 
 0.528
OOO03363.1
Hypothetical protein.
    
  0.520
Your Current Organism:
Chromatiales bacterium USCgTaylor
NCBI taxonomy Id: 1934255
Other names: C. bacterium USCg_Taylor, Chromatiales bacterium USCg_Taylor
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.